model.SCVI(adata[, n_hidden, n_latent, …])
model.SCVI
single-cell Variational Inference [Lopez18].
model.SCANVI(adata, unlabeled_category[, …])
model.SCANVI
Single-cell annotation using variational inference [Xu19].
model.TOTALVI(adata[, n_latent, …])
model.TOTALVI
total Variational Inference [GayosoSteier20].
model.LinearSCVI(adata[, n_hidden, …])
model.LinearSCVI
Linearly-decoded VAE [Svensson20].
model.AUTOZI(adata[, n_hidden, n_latent, …])
model.AUTOZI
Automatic identification of ZI genes [Clivio19]
model.GIMVI(adata_seq, adata_spatial[, …])
model.GIMVI
Joint VAE for imputing missing genes in spatial data [Lopez19].